Lawrence Hon - Millbrae CA, US Serge Saxonov - San Mateo CA, US Brian Thomas Naughton - Mountain View CA, US Joanna Louise Mountain - Menlo Park CA, US Anne Wojcicki - Palo Alto CA, US Linda Avey - Lafayette CA, US
Assignee:
23andMe, Inc. - Mountain View CA
International Classification:
G06F 7/00
US Classification:
702 19, 702 20, 703 11, 707700
Abstract:
Determining relative relationship includes receiving recombinable deoxyribonucleic acid (DNA) information of a first user and recombinable DNA information of a second user, determining, based at least in part on the recombinable DNA information of the first user and recombinable DNA information of the second user, a predicted degree of relationship between the first user and the second user, and in the event that the expected degree of relationship between the first user and the second user at least meets the threshold, notifying at least the first user about a relative relationship with the second user.
Alexander Wong - Palo Alto CA, US Oleksiy Khomenko - Stanford CA, US Serge Saxonov - Seattle WA, US Brian Thomas Naughton - Mountain View CA, US Lawrence Hon - Millbrae CA, US
Assignee:
23andMe, Inc. - Mountain View CA
International Classification:
G06F 7/00 G06F 17/30
US Classification:
707700, 707737, 707758, 702 20
Abstract:
Processing genetic data is disclosed, including: receiving two or more genetic data sets for an individual from one or more genetic data sources; merging the genetic data sets from the one or more genetic data sources, including identifying a duplicate SNP between the genetic data sets and determining one or more data values to be stored for the duplicate SNP; and storing a single set of merged genetic data for the individual.
Alexander Wong - Palo Alto CA, US Oleksiy Khomenko - Stanford CA, US Serge Saxonov - Seattle WA, US Brian Thomas Naughton - Mountain View CA, US Lawrence Hon - Millbrae CA, US
International Classification:
G06F 19/00
US Classification:
702 20
Abstract:
Determining a genetic sequence for a particular site on an individual's genome is disclosed, including: receiving a measurement associated with a particular sequence for the particular site on the individual's genome, receiving contextual information associated with a context of the individual within a larger collection of genetic information, and using the measurement associated with the particular sequence and the contextual information to compute an improved determination of the genetic sequence at the particular site on the individual's genome.
- Mountain View CA, US Oleksiy Khomenko - Stanford CA, US Serge Saxonov - San Mateo CA, US Brian Thomas Naughton - Mountain View CA, US Lawrence Hon - Millbrae CA, US
Assignee:
23andMe, Inc. - Mountain View CA
International Classification:
G06F 17/30
US Classification:
707691
Abstract:
Processing genetic data includes receiving two or more genetic data sets for an individual from one or more genetic data sources, wherein the genetic data sets comprises data pertaining to the individual's deoxyribonucleic acid (DNA); merging the genetic data sets from the one or more genetic data sources to obtain a set of merged genetic data for the individual, including: identifying data in the genetic data sets that is conflicting, the identified data corresponding to a genetic marker associated with a variation that occurs at a region in the individual's genome; analyzing the identified data to resolve a discrepancy attributed to the identified conflicting data and automatically determine an appropriate value that corresponds to the genetic marker, the analysis and the determination being based at least in part on contextual information; and storing the appropriate value in the set of merged genetic data.
Color Genomics
Engineer and Bioinformatics
Color
Engineer and Bioinformatics
Dappled.io May 2016 - Mar 2017
Starting Up
Pacific Biosciences Oct 2011 - Apr 2016
Senior Manager, Bioinformatics
Startup May 2010 - Oct 2011
Founder
Education:
University of California, San Francisco 2000 - 2005
Doctorates, Doctor of Philosophy, Bioinformatics
Stanford University 1994 - 1998
Bachelors, Bachelor of Science, Computer Science, Biology
University of California
Skills:
Bioinformatics Genomics Computational Biology Sequencing Biotechnology Genetics Molecular Biology Dna Sequencing Sequence Analysis Dna Life Sciences Pcr Ngs Assay Development Lifesciences Drug Discovery
Staff Scientist, Bioinformatics At Pacific Biosciences
Staff Scientist, Bioinformatics at Pacific Biosciences
Location:
San Francisco Bay Area
Industry:
Biotechnology
Work:
Pacific Biosciences since Oct 2011
Staff Scientist, Bioinformatics
Startup May 2010 - Oct 2011
Founder
23andMe Dec 2007 - May 2010
Scientist
Genentech Jan 2006 - Nov 2007
Postdoctoral Fellow
Sapient Jan 1999 - May 2000
Consultant
Education:
University of California, San Francisco 2000 - 2005
Stanford Sep 1994 - Jun 1998