Lukasz Salwinski

US Patent:

20050251375, Nov 10, 2005

Filed:

May 6, 2005

Appl. No.:

11/123846

Inventors:

Lukasz Salwinski - Los Angeles CA, US
David Eisenberg - Los Angeles CA, US

International Classification:

G06G007/48
G06G007/58

US Classification:

703011000, 703012000

Abstract:

A stochastic simulation method for simulating the kinetics of chemical networks implemented using reprogrammable Field Programmable Gate Array (FPGA) devices. Such devices, built as an array of simple configurable logic blocks embedded in a programmable interconnection matrix, implement highly parallel architectures comparable in complexity to biochemical networks. Circuits based on FPGAs scale efficiently so that simulations of realistic biological systems are possible.