David B Hoard

US Patent:

20230127610, Apr 27, 2023

Filed:

Sep 19, 2022

Appl. No.:

17/947445

Inventors:

- Carlsbad CA, US
Harrison LEONG - San Francisco CA, US
Theodore E. STRAUB - Lexington MA, US
David HOARD - Escondido CA, US

Assignee:

LIFE TECHNOLOGIES CORPORATION - Carlsbad CA

International Classification:

G06F 16/2457
G06F 16/248
G16B 45/00

Abstract:

A computer-implemented method for generating a data visualization for operating a digital polymerase chain reaction (dPCR) system comprises, the method comprising receiving fluorescent emission data comprising a plurality of data points corresponding to fluorescence emission from a plurality of reaction sites of a substrate, the fluorescent emission data indicative of presence or absence of amplification product of a dPCR. The method further comprises displaying a data visualization of the plurality of data points in a spatial representation of the substrate such that each data point is displayed at a relative spatial location of its corresponding reaction site of the plurality of reaction sites of the substrate, a first set of data points being displayed with a first indication based on meeting a first quality value threshold and second set of data points being displayed with a second indication, differing from the first indication, based on a second quality value threshold.

US Patent:

20230022224, Jan 26, 2023

Filed:

Jul 11, 2022

Appl. No.:

17/861854

Inventors:

- Carlsbad CA, US
Nivedita Sumi MAJUMDAR - San Bruno CA, US
Jeffrey A. MARKS - Mountain View CA, US
Theodore E. STRAUB - Lexington MA, US
Ryan J. TALBOT - Stamford CT, US
Kevin S. BODNER - Belmont CA, US
David HOARD - Escondido CA, US

Assignee:

LIFE TECHNOLOGIES CORPORATION - Carlsbad CA

International Classification:

G06T 11/20
G16B 45/00

Abstract:

A method comprises displaying, on a graphical user interface (GUI), a first data visualization comprising a positional representation of a plurality of reaction sites from at least a portion of a substrate, wherein the positional representation of the first data visualization simultaneously indicates relative data quality of the plurality of reaction sites; and altering the first data visualization displayed on the GUI to a second data visualization, the second data visualization comprising the positional representation of the plurality of reaction sites from the at least the portion of the substrate, wherein the positional representation of the second data visualization simultaneously indicates relative data quality of the plurality of reaction sites from at least the portion of the substrate based on a comparison of the data quality values of the plurality of reaction sites an adjusted quality value threshold.

US Patent:

20210042972, Feb 11, 2021

Filed:

Jul 24, 2020

Appl. No.:

16/937634

Inventors:

- Carlsbad CA, US
Nivedita Sumi MAJUMDAR - San Bruno CA, US
Jeffrey A. MARKS - Mountain View CA, US
Theodore E. STRAUB - Lexington MA, US
Ryan J. TALBOT - Stamford CT, US
Kevin S. BODNER - Belmont CA, US
David HOARD - Escondido CA, US

Assignee:

LIFE TECHNOLOGIES CORPORATION - Carlsbad CA

International Classification:

G06T 11/20
G16B 45/00

Abstract:

A method for generating a data visualization is provided. The method includes displaying a representation of a portion of detected data from a substrate to a user. The method further includes generating a data quality value for the portion of detected data and displaying, along with the representation of the portion of detected data, an indication of data quality value for the portion of detected data. The method further includes selecting, by the user, a quality value threshold, and displaying an adjusted indication of data quality value for the portion of detected data meeting the quality value threshold.

US Patent:

20170177792, Jun 22, 2017

Filed:

Mar 24, 2015

Appl. No.:

15/128859

Inventors:

- Carlsbad CA, US
Harrison LEONG - San Francisco CA, US
Shakila POTHINI - Union CIty CA, US
David HOARD - Escondido CA, US
Christopher FONG - Pleasanton CA, US
Pratik Simon SOARES - Foster City CA, US
Salil KUMAR - Princeton NJ, US
Thomas WESSEL - Pleasanton CA, US
Manjula ALIMINATI - Santa Clara CA, US
Levente EGRY - Sunnyvale CA, US

International Classification:

G06F 19/28
G06F 19/26
G06F 17/30
G06F 19/22

Abstract:

A system for analyzing biological data, comprising: a storage configured to store a plurality of data files containing biological data obtained from a plurality of devices; a server configured to: host a plurality of applications, each configured to be implemented on the server and to provide analysis, manipulation, comparison, visualization, or a combination thereof, of the biological data included in the data files, wherein the plurality of applications allow a user to analyze different data files related to the same sample and compare the results of the analysis.

US Patent:

20160275149, Sep 22, 2016

Filed:

Jun 27, 2014

Appl. No.:

14/392323

Inventors:

- Carlsbad CA, US
Harrison Leong - San Francisco CA, US
Theodore E. Straub - Burlingame CA, US
David Hoard - Escondido CA, US

International Classification:

G06F 17/30

Abstract:

A method for generating a data visualization is provided. The method includes receiving a plurality of data points related to fluorescent emissions values from a plurality of reaction sites. The fluorescent emission values include information for a first type of dye and a second type of dye. The method further includes displaying a first portion of the plurality of data points related to the first type of dye in a representation of location of the plurality of reaction sites, and displaying a second portion of the plurality of data points related to the second type of dye in the representation. The method further includes displaying the first portion of the plurality of data points in a scatter plot display. The scatter plot shows fluorescent values related to the first dye on the y-axis and fluorescent values related to the second dye on the x-axis. The method includes displaying the second portion of the plurality of data points in the scatter plot display.

US Patent:

20160239990, Aug 18, 2016

Filed:

Feb 5, 2016

Appl. No.:

15/017136

Inventors:

- Carlsbad CA, US
Lik Seng Lau - Singapore, SG
Kok Siong Teo - Singapore, SG
Zeng Wei Chu - Singapore, SG
Lian Seng Loh - Singapore, SG
Vanee Pho - San Francisco CA, US
Michael Uy - Singapore, SG
David Hoard - Escondido CA, US
Sean Zimmerman - San Diego CA, US

International Classification:

G06T 11/20
G06F 3/0488
G06F 3/0484
G06F 3/0485
G06T 3/40
G06F 3/0482

Abstract:

In one exemplary embodiment, a method for identifying a reaction site associated with an amplification curve from a plurality of amplification curves is provided. The method includes receiving amplification data from a plurality of reaction sites, wherein each reaction site contains a sample. The method further includes generating a plurality of amplification curves from the amplification data and displaying a first portion of the plurality of amplification curves on a display screen. The method includes displaying a list of indications of reaction sites associated with the first portion of amplification curves alongside the first portion of amplification curves on the display screen. Then, the method includes adjusting the view to display a second portion of the plurality of amplification curves. The method further includes dynamically adjusting the list to display indications of reaction sites associated with the second portion of amplification curves alongside the second portion of amplification curves on the display screen, wherein the list is configured to be scrollable.

US Patent:

20150269756, Sep 24, 2015

Filed:

Nov 7, 2013

Appl. No.:

14/441500

Inventors:

- Carlsbad CA, US
Nivedita Sumi Majumdar - Foster City CA, US
Jeffrey A. Marks - Mountain View CA, US
Theodore E. Straub - Burlingame CA, US
Ryan J. Talbot - Stamford CT, US
Kevin S. Bodner - Belmont CA, US
David Hoard - Escondido CA, US

International Classification:

G06T 11/20

Abstract:

A method for generating a data visualization is provided. The method includes displaying a representation of a portion of detected data from a substrate to a user. The method further includes generating a data quality value for the portion of detected data and displaying, along with the representation of the portion of detected data, an indication of data quality value for the portion of detected data. The method further includes selecting, by the user, a quality value threshold, and displaying an adjusted indication of data quality value for the portion of detected data meeting the quality value threshold.